Showing posts with label the future is now. Show all posts
Showing posts with label the future is now. Show all posts

Wednesday, May 6, 2015

On Failures of Imagination

Yesterday I talked about 'expected surprises' with regards to Yi qi. Yi qi is a surprise because its anatomy is so unlike other theropods, and it suggests that dinosaurs were experimenting with flight and/or gliding in some ways that were quite different from our current understanding of feather and bird wing evolution. But it was also not entirely unexpected, because scansoriopterygids had super weird anatomy to begin with that gave us enough information to speculate about possible gliding adaptations in those dinosaurs, even though the general consensus was that it was pretty far-fetched.

But today I wanted to talk about a related feeling, which I like to call the Failure of Imagination. Last summer I was working my way through a DVD set of classic sci-fi, fantasy, and adventure movies that I had picked up at some point. I wound up watching a lot of these with friends and basically Mystery Science Theatre 3000-ing the films, and in particular the old space adventure movies from the 40s-60s provided much entertainment. It's really fun to take a look back and see what sorts of things people envisioned the future holding for us – space travel, exoplanet exploration, robots. But what also struck me was the things that the filmmakers and storywriters couldn't even imagine. 

They could imagine spaceships and robots, but they couldn't imagine wireless technology. Or storing information in digital form rather than on spools of tape. 

They couldn't imagine non-button-and-dial-based instrumentation. 

And they definitely couldn't imagine women in roles other than administrative assistants (or as the bad guys). SO MANY SPACE SECRETARIES.


I kept thinking to myself – what sorts of failures of imagination are we having in palaeontology today? We can imagine so many things. But I wonder what kinds of things we won't even know we don't know. When we try our hand at speculative biology, what will scientists 80 or 100 years from now think was charming, or quaint, or ahead of its time. Failures of imagination are one of those things that make me nervous as a scientist, because I don't like the idea that I won't even know what I'm not imagining.

Tuesday, May 5, 2015

On Surprises

I love surprises. Which is unfortunate for me, because I am extremely bad at being surprised. And it's hard to be surprised by things as you get older, and as easier access to more and more information becomes available to us every day.

But boy, when a surprise comes along that actually takes me by surprise, what a thing to be able to savour.


An extraordinary painting of Yi qi by Emily Willoughby, CC-BY.

So, enter Yi qi. In many ways, it's hardly a surprise at all – numerous artists produced wonderful speculative art about scansoriopterygids predicting membranous wings and/or gliding abilities, and there was even this neat hypothetical Archaeopteryx ancestor that I found in a paper a few years ago. At the time, I wrote on Facebook: "I had not realized that a bat-winged proto-bird was an idea that was on the table!"

(I also wrote, "I like his smirk, lack of neck, and skinny skinny tail", and I agree with Past Victoria about all of those things.)

While Yi qi might not really be a proto-bird, it's still an amazing discovery that shows there was a lot of experimenting with flying and gliding going on back in the Mesozoic, which is perhaps unsurprising, given that lots of disparate groups of animals use gliding to their advantage today – fish, frogs, rodents, marsupials, dermopterans, you name it. And yet, even though there's lots of precedent for gliding vertebrates, and others had predicted something kind of like Yi qi before, I was still genuinely shocked when I saw the paper and press images. What a great feeling.

What I love best about Yi qi, apart from it's extremely meme-able name, is that it's a great example of maybe what I'll call an 'expected surprise'. A surprise that, as soon as you see it, it seems so obvious and like it should have been there all along. It's like the opposite of a failure of imagination. Surely there is a long German word that captures this specific emotion? What other expected surprises are lurking out there in our futures? What things have we speculated on today, dismissed as being way too out there to take seriously, and yet will pop up as really-for-real things later on?


I guess I need to get to work on some ankylosaur speculative biology! Maybe we'll find the real Yee?

Tuesday, April 16, 2013

Dinosaurs 101


In addition to working through the home stretch of my PhD, an exciting project has kept me hopping for the last few months. I'm part of the team creating the University of Alberta's flagship MOOC, in partnership with Udacity: Dino 101: Dinosaur Paleobiology. If MOOC is a new acronym for you, don't worry - it was for me, too. There will be three flavours, so to speak, of Dino 101, but all will feature the same online content. Dino 101 will be available through Udacity, for free, to everyone around the world. Registered University of Alberta students who want to take the course for credit will register for PALEO 200 (online only), or PALEO 201 (same online content, but with additional in-person activities like field trips).

Working on Dino101 has been a great experience for me so far, even though it can be challenging. We're working closely with educational specialists to make sure the pedagogy is sound, and that our assessments will be rigorous. We want to make sure that real learning will occur. We've spent a lot of time thinking about the foundational aspects of the course, like what our learning outcomes will be, and what skills will be tested. I've been learning a lot about educational theory - even though the scale of MOOCs is new, there's a lot of people on board with this project who have researched the best ways to deliver and assess online content. We also have a great team working on unique interactives for the course, which should enhance the experience for students.

As we finish off scripts and move into production, I'm looking forward to seeing some of the cool ideas we have planned for teaching the basic concepts of dinosaur palaeontology come to life. I also hope that this course will serve as a springboard for people who are interested in animal biology and geology, and that everyone will come away with a better understanding of the scientific method.

I hope we'll see you in Dino101 when we launch this September!

(Check out the UofA's official Dino101 page for more information and to sign up for updates.)

Saturday, September 29, 2012

Ultimate ROM

This summer, the Royal Ontario Museum unveiled a brand-new exhibit all about the dinosaurs of Gondwana. When Pangaea rifted apart during the Triassic, it split into two continents - Laurasia, represented by the modern northern continents of North America, Europe, and Asia, and Gondwana, represented by the modern southern continents of South America, Africa, Australia, and Antarctica, plus India, Madagascar, and New Zealand. The dinosaurs and other extinct terrestrial vertebrates of Gondwana differed from their northern neighbours, and we don't often see them in exhibitions in North America.
 
Ultimate Dinosaurs: Giants of Gondwana features lots of interesting and sometimes obscure dinosaurs, some really great artwork, and some neat technological things (of which I am sometimes skeptical, but can wholeheartedly endorse here).
 
 
 
After a brief but informative introduction to plate tectonics, we're introduced to some of the earliest dinosaurs, like Herrerasaurus, Eoraptor, and the early ornithischian Pisanosaurus. In an exhibit that is definitely dominated by saurischian dinosaurs, it was neat to see this little fellow! Take note of the beautiful murals in the background, painted by Canadian palaeoartist Julius Csotonyi.
 
 
 
Ah, Cryolophosaurus. My second favourite dinosaur from Antarctica! ;)
This restoration of Cryolophosaurus definitely seems to have a more Dilophosaurus-y look to the skull, perhaps a result of recent phylogenetic analyses recovering a close relationship between the Antarctic taxon and other early, crested theropods.
 
 
 
As we move into the Cretaceous, the dinosaurs are arranged by geographic area on platforms. First off are African dinosaurs, including Malawisaurus, Nigersaurus, Carcharodontosaurus, and (shown here), Suchomimus.
 
 
 
I was super excited to see a mounted skeleton of Ouranosaurus, a bizarre sail-backed iguanodontian.
 
 
 
Ok, hands-down my favourite critter featured in this exhibition was one of the smaller skeletons, and not a dinosaur! I am sorry, dinosaur colleagues! But his adorable stubby tail and marvelous coat of osteoderms stole my heart. This is Simosuchus, a herbivorous crocodilian from Madagascar.
 
 
 
 I'll perhaps also add that the Madagascar 'pod' of Majungasaurus, Rapetosaurus, Masiakasaurus, and Rahonavis was probably my favourite part of the exhibition, just because I've never seen any of these taxa as mounted skeletons before, and because they're just so, so weird. Also, Majungasaurus just wants a hug, WHY DON'T YOU LOVE ME, RAPETOSAURUS?
 
 
 
I was very fortunate to get to see a lot of Patagonian dinosaurs last November during my visit to Argentina, but I'd never seen Austroraptor before. He is BIG! This 'pod' also features Buitreraptor, Carnotaurus, and Amargasaurus.
 
 
 
 
Although the dinosaurs are the main attraction, the main take-home messages of the exhibition are 1) continents move and 2) evolution happens. The dinosaurs are just the vehicle for delivering an exhibit that is actually all about the effects of plate tectonics on evolution, and I think that's awesome. Palaeogeography is prominently featured throughout the exhibition, and there's even an interactive team puzzle where you reassemble the continents into Gondwana. However, one of the most incredible things in the exhibit were the two giant Blakey palaeomap globes, animated to show the drifting of the continents. As you enter the exhibit, Pangaea breaks apart, and as you leave, the continents assemble into their current positions, and then keep going into the future! The video projections are staggeringly beautiful.
 
Honestly, I think this is one of the best dinosaur exhibits I have seen. It is bright, colourful, up to date, and packed with really good information not just about dinosaurs, but about broader themes in geology and evolution as well. Ultimate Dinosaurs is at the ROM for a limited time (I think until the end of 2012) and then it (hopefully!) goes on tour. GO SEE IT!

Thursday, September 29, 2011

You can pick your friends, and you can pick your nose...and you can definitely pick your ankylosaur's nose.


Say hello to Euoplocephalus, the best known ankylosaur you've never heard of. Besides Pinacosaurus from Mongolia and China, there are more specimens referred to Euoplocephalus than to any other ankylosaurid, and it is certainly the most well represented ankylosaurid from North America. Yet Euoplocephalus often gets overlooked because its younger cousin is THAT ankylosaur, the one that starred at the World's Fair and was in Jurassic Park III and Clash of the Dinosaurs and Dinosaur Revolution and gets all the cool toys and, you know, is the namesake of the group. You know, Ankylosaurus. Well, hopefully you'll be hearing more from me about Euoplocephalus over the coming months. Today we'll be picking its nose.

Ankylosaurs are kind of weird as dinosaurs goes, because they get rid of things like the antorbital and supraorbital fenestrae, and tuck the laterotemporal fenestrae back behind the squamosals and quadratojugals. In a sense, the windows to the skull are all closed, and so it's hard to see some of the internal features that are more visible on other dinosaur skulls. Our new paper describes UALVP 47977, a busted up Euoplocephalus skull from Dinosaur Provincial Park. Normally, busted skulls don't appear very exciting, as important pieces might be missing, and they don't make very good display specimens. In this case however, UALVP 47977 gives us more information because it is broken! This specimen shows off details of the braincase and nasal passages that we don't typically get to see, including impressions of blood vessels.

I am trying (slowly but surely) to sort out the mess that is the genus Euoplocephalus, and so I was interested in comparing UALVP 47977 with other skulls to see if any of its features were present in other skulls. The only other skull that is naturally broken in a similar way is AMNH 5238, and it looks pretty similar - it even has blood vessel impressions in the same place (this specimen is also super cool because it has ciliary osteoderms, or, bony eyelids!). I was delighted when Dr. Larry Witmer made the CT scans of AMNH 5405 available on his website following the Witmer and Ridgely (2008) publication on paranasal sinuses. I also made arrangments to CT scan UALVP 31, one of our 'classic' University of Alberta specimens.

With CT scans in hand, I went through the process of eliminating matrix from the inside of the nasal passages (in essence, picking their noses), so I could examine the skull roof of these two specimens. This process is called segmentation, which means that you place a 'mask' over the parts of the CT scan that you want to appear in the 3D model, and remove the mask where you don't want something in the model. Although the software we use, Mimics, has lots of tools to help speed up the segmentation process, with fossils sometimes the contrast between bone and stone is not very great. As a result, sometimes you just have to go through the CT scans slice by slice and trace out by hand what you want to keep. This is super tedious work at times and I have the utmost respect for the amazing 3D visualizations that come out of Dr. Witmer's lab. Eventually we invited Dr. Witmer to collaborate on the paper with us, but I think it was good that we were able to independently test their 3D model using different software and fresh eyes, a sentiment echoed over on the WitmerLab blog.


The segmentation process begins! All of that uniformly-dense stuff in the palatal area has to go. The green 'mask' will be eliminated wherever there is matrix instead of bone, leaving only the bone in the 3D model.

I won't go into too much detail on the paper here, but I will say that this was a tough but very interesting project to work on. I've learned a lot about braincases and brains and noses over the course of writing this manuscript, but I'm sure I've still got more to learn. I've definitely had a lot of moments where I felt pretty stupid for not knowing certain things, but I think perhaps part of science is getting outside of your comfort zone. Ankylosaur tails are good, but skulls are pretty fun too, and I hope I can share some more skull papers with you soon! 

Here's a video we put together for the press release accompanying the paper, featuring the ever lovely UALVP 31.



Literature!

Miyashita T, Arbour VM, Witmer LM, Currie PJ. 2011. The internal cranial morphology of an armoured dinosaur Euoplocephalus corroborated by X-ray computed tomographic reconstruction. Journal of Anatomy, first published 29 Sept 2011, doi:10.111/j.1469.-7580.2011.01427.x.


And check out the post over at Pick & Scalpel, which has more information and some great images!




...and finally, because this has certainly helped me sometimes:
Schwartz MA. 2008. The importance of stupidity in scientific research. Journal of Cell science 121:1771.